PREVALENCE AND SPECIFIC REGIONAL FEATURES OF GENETIC STRUCTURE AND DRUG RESISTANCE OF TUBERCULOSIS MYCOBACTERIA OF HAARLEM FAMILY AMONG TUBERCULOSIS PATIENTS IN SARATOV REGION
https://doi.org/10.21292/2075-1230-2017-95-5-60-64
Abstract
Goal: to study prevalence and specific regional features of genetic structure and drug resistance of M. tuberculosis of Haarlem family, circulating on the territory of Saratov Region.
Materials and methods. Genotyping of 152 clinical isolates from sputum of active mostly new pulmonary tuberculosis patients was performed using hybridization on the biological mircochip with reagents of Spoligo-Biochip (OOO BIOCHIP-IMB, Moscow).
Results. It was found out that among genetically heterogeneous strains of M. tuberculosis circulating on the territory of Saratov Region, mycobacteria of Haarlem family were registered in 23.7% of cases, i.e. practically in each fourth patient. Mycobacteria belonging to this genotype were characterized by genetically diverse structure of strains, which could be the evidence of their circulation on this territory for a continuous period of time. Mycobacteria of Haarlem family prevailed in the patients with destruction of lung tissue and positive results of sputum tests (86.1%), and multiple drug resistance was especially high in these mycobacteria (25%), which was typical of Saratov Region since according to data of other studies mycobacteria of Haarlem family were of low virulence and more associated with drug susceptible forms of tuberculosis.
About the Authors
T. Yu. SаlinаRussian Federation
Doctor of Medical Sciences, Associate Professor
T. I. Morozovа
Russian Federation
Doctor of Medical Sciences, Professor, Head of FPK and PPS Tuberculosis Control Department
References
1. Baranov А.А., Maryandyshev А.O., Markelov Yu.M., Byune G., Dale U. Molecular epidemiology of tuberculosis in four administrative regions of Barents Region of the Russian Federation. Ekologiya Cheloveka, 2007, no. 9, pp. 34-38. (In Russ.)
2. Мокроусов И.В. Geneticheskaya raznoobraziye i evolyutsiya Mycobacterium tuberculosis. Avtoref diss. dokt. biol. nauk. [Genetic variety and evolution of Mycobacterium tuberculosis. Doct. Diss.]. St. Petersburg, 2009, 40 p.
3. Mokrousov I.V. Methodical approaches to genotyping to Mycobacterium tuberculosis for evolutional and epidemiological research. Infektsiya and Immunitet, 2012, vol. 2, no. 3, pp. 603-614. (In Russ.)
4. Ogarkov O.B., Medvedeva T.V., Zozio T., Pogorelov V.I., Nekipelov O.M., Gutnikova M.Yu., Kuptsevich N.Yu., Ushakov I.V., Sola C. Molecular typing of tuberculosis mycobacteria strains in Irkutsk Region (Eastern Siberia) in 2000-2005. Molekulyarnaya Meditsina, 2007, no. 2, pp. 33-38. (In Russ.)
5. Poteyko P.I., Shevchenko O.S., Krutko V.S., Lyashhenko А.А., Filipenko M.L., Rot M.А. Genetic strains of M. tuberculosis in new tuberculosis patients in Kharkov. II kongress Natsionalnoy assotsiatsii ftiziatrov: sb. tez. [IInd Congress of National Association of Phthisiologists. Abst. Book]. St. Petersburg, 2013, pp. 69. (In Russ.)
6. Raviglione M.C. Korobitsin A.A. End TB – The new WHO strategy in the SDG era, and the contributions from the Russian Federation. Tuberculosis and Lung Diseases, 2016, no. 11, pp. 7-15. (In Russ.)
7. Savilov E.D., Sinkov V.V., Ogarkov O.B. Epidemiologiya tuberkuleza na Evro-aziatskom kontinente: otsenka globalnogo dvizheniya shtammov genotipa «Pekin» – Irkutsk. [Epidemiology of tuberculosis in Euro-Asian Continent: evaluation of global movement of strains of Beijing genotype - Irkutsk]. RIO GBOU DPO IGMAPO Publ., 2013, 120 p.
8. Skornyakov S.N., Umpeleva T.V., Vyazovaya А.А., Kravchenko M.А., Eremeeva N.I., Narvskaya O.V. Genotyping of Ural isolates of Mycobacterium tuberculosis. Fundamentalnye Issledovaniya, 2014, no. 9, pp. 2485-2488. (In Russ.)
9. Chernousova L.N., Golyshevskaya V.I., Erokhin V.V., Kuznetsov S.I., Zakharova S.M., Melentiev А.S., Fedorin I.M., Nikolaevskiy V.V., Radi M., Balabanova Ya.M., Drobnevskiy F. Prevalence of Mycobacterium tuberculosis strains of Beijing family and risk factors of their transmission in Samara Region. Probl. Tuberkuleza i Bolezni Legkikh, 2006, no. 2, pp. 31-37. (In Russ.)
10. David S., Raposo Ribeiro D., Antunes A., Portugal C., Sancho L., Germano de Sousa J. Contribution of spoligotyping to the characterization of the population structure of Mycobacterium tuberculosis isolates in Portugal. Infection. Genetics and Evolution, 2007, no. 7, pp. 609-617.
11. Demay C., Liens B., Burguiere T., Hill V., Couvin D., Millet J., Mokrousov I., Sola S., ZozioT., Rastogi N. SITVITWEB – A publicly available international multi-marker database for studying Mycobacterium tuberculosis genetic diversity and molecular epidemiology. Infection, Genetics and Evolution, 2012, vol. 12, pp. 755-766.
12. Kato-Maeda M., Kim E.Y., Flores L., Jarlsberg L.G., Osmond D., Hopewell P.C. Differences among sublineages of the East-Asian lineage of Mycobacterium tuberculosis in genotypic clustering. Int. J. Tuberc. Lung. Dis., 2010, vol. 14, no. 5, pp. 538-544.
13. Mokrousov I. The guiet and controversial: Ural family of Mycobacterium tuberculosis. Infect. Genet. Evol., 2012, no. 12 (4), pp. 619-629.
14. Nicol M.P., Wilkinson R.J. The clinical conseguences of strain diversity in Mycobacterium tuberculosis. Trans. R. Soc. Trop. Med. Hyg., 2008, vol. 102, pp. 955-965.
Review
For citations:
Sаlinа T.Yu., Morozovа T.I. PREVALENCE AND SPECIFIC REGIONAL FEATURES OF GENETIC STRUCTURE AND DRUG RESISTANCE OF TUBERCULOSIS MYCOBACTERIA OF HAARLEM FAMILY AMONG TUBERCULOSIS PATIENTS IN SARATOV REGION. Tuberculosis and Lung Diseases. 2017;95(5):60-64. (In Russ.) https://doi.org/10.21292/2075-1230-2017-95-5-60-64