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Spoligotyping of tuberculous mycobacteria isolated from humans and cattle

https://doi.org/10.21292/2075-1230-2020-98-3-13-18

Abstract

Objective: to analyze the species and genetic families of tuberculous mycobacteria isolated from humans and cattle by spoligotyping.

Subjects and methods. Biological materials collected in the cattle, livestock farmers (who underwent annual fluorographic examinations) and tuberculosis patients were studied. To identify mycobacteria, the spoligotyping method was used.

Results. The article assesses the variability of sites within direct repeats (spacers), which are used in laboratory diagnostics for spoligotyping of mycobacteria and identification of tuberculosis pathogens. The frequency of combinations of different spacers in the analyzed mycobacteria in the specimens identified as Mycobacterium tuberculosis complex is compared with the spoligotyping profile of known mycobacteria thus establishing their belonging to a specific genetic family The studied isolates were tested by microscopic, bacteriological, and molecular genetic (PCR) methods. Based on the results of spoligotyping, it was found out that they belonged to genetic families of M. tuberculosis of Beijing, LAM, and Haarlem.

About the Authors

N. I. Khаmmаdov
Federal Center for Toxicological, Radiation and Biological Safety
Russian Federation

Nail I. Khammadov - Leading Researcher of Biochemical and Molecular Genetic Analysis Laboratory.

Nachny Gorodok-2, Kazan, Tatarstan Republic, 420075



T. Kh. Faizov
Federal Center for Toxicological, Radiation and Biological Safety
Russian Federation

Tagir Kh. Faizov - Head of Biochemical and Molecular Genetic Analysis Laboratory.

Nachny Gorodok-2, Kazan, Tatarstan Republic, 420075



K. A. Osyanin
Federal Center for Toxicological, Radiation and Biological Safety
Russian Federation

Konstantin A. Osyanin - Senior Researcher of Biochemical and Molecular Genetic Analysis Laboratory.

Nachny Gorodok-2, Kazan, Tatarstan Republic, 420075



A. V. Khаmmаdovа
Kazan University
Russian Federation

Alfia V. Khammadova - Master's Student of the 2nd Year of Study of Institute of Environmental Sciences.

18, Kremlevskaya St., Kazan, Tatarstan Republic, 420008



K. S. Khаertynov
Federal Center for Toxicological, Radiation and Biological Safety; Kazan State Medical Academy, Branch of Russian Medical Academy for Professional Development
Russian Federation

Kamil S. Khaertynov - Head of Central Research Laboratory.

36, Butlerova St., Kazan, Tatarstan Republic, 420012



E. A. Shuralev
Federal Center for Toxicological, Radiation and Biological Safety; Kazan University; Kazan State Medical Academy, Branch of Russian Medical Academy for Professional Development
Russian Federation

Eduard A. Shuralev - Associate Professor of Applied Ecology Department of Sciences of Institute of Environmental Sciences.

18, Kremlevskaya St., Kazan, Tatarstan Republic, 420008



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Review

For citations:


Khаmmаdov N.I., Faizov T.Kh., Osyanin K.A., Khаmmаdovа A.V., Khаertynov K.S., Shuralev E.A. Spoligotyping of tuberculous mycobacteria isolated from humans and cattle. Tuberculosis and Lung Diseases. 2020;98(3):13-18. (In Russ.) https://doi.org/10.21292/2075-1230-2020-98-3-13-18

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ISSN 2075-1230 (Print)
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